ggVolcanoR: Visualize differential expression datasets
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Nov 22, 2024
About the app
ggVolcanoR shiny app allows for customizable generation and visualization of volcano plots, correlation plots, upset plots, and heatmaps for differential expression datasets, via a user-friendly interactive interface in a web-based application without requiring programming expertise. A volcano plot is a visualization tool used in genomics and statistical analysis to identify and visualize differences in gene expression or statistical significance between two conditions. It typically displays log-fold changes on the x-axis and the negative logarithm of the p-values on the y-axis, allowing for a intuitive assessment of which genes or variables exhibit substantial changes in response to a condition. ggVolcanoR offers practical options to optimize the generation of publication-quality volcano and other analytical plots for analyzing and comparing dysregulated genes/proteins across multiple differential expression datasets. Published: Comput Struct Biotechnol J. 2021 Oct 13:19:5735-5740.
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